rs799487 chr14:34981225 A>T
- Sequence
acacacacacacacacacacacac[A/T]ctctcgcatacaggcataggatag
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells) K562 (myelogenous leukemia)
- ASB for transcription factors
- FOXA2_HUMAN FOXP1_HUMAN FOXK2_HUMAN SKI_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 0.86 | n/a | 1.50 | n/a | No Hit | |||
| FOXP1_HUMAN | 2.12 | -2.40 | 1.50 | n/a | No Hit | |||
| FOXK2_HUMAN | 1.70 | 0.28 | 1.50 | n/a | n/a | |||
| SKI_HUMAN | 1.78 | -2.06 | 1.50 | n/a | n/a | |||
| HDAC2_HUMAN | 1.93 | -2.46 | 1.50 | n/a | n/a |
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