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rs799488 chr14:34982204 T>C

Sequence
aataaaatccctcttcttgtatac[T/C]agggctcgctcttgttaattggtg
ASB in cell types
GM12878 (female B-cells) breast tumor tissue
ASB for transcription factors
FOXK2_HUMAN ESR1_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN -2.63 2.04 1.000.01 1.50 n/a n/a
ESR1_HUMAN n/a 2.00 1.000.02 2.50 n/a No Hit
CTCF_HUMAN 0.23 0.76 0.950.05 1.39 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels major depressive disorder obesity with early age of onset (age >2) refractive error
GTEx eQTL Artery_Tibial Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Hippocampus Brain_Hypothalamus Brain_Putamen_basal_ganglia Brain_Substantia_nigra Cells_Cultured_fibroblasts Esophagus_Mucosa Heart_Left_Ventricle Muscle_Skeletal Nerve_Tibial Skin_Sun_Exposed_Lower_leg Testis Whole_Blood

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