rs800332 chr10:44311222 C>A
- Sequence
ccacggccggcgggcggctgcctc[C/A]aggctccaccacaggagggggagc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) erythroid cells erythroid progenitors K562 (myelogenous leukemia)
- ASB for transcription factors
- SMC3_HUMAN ZFX_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 1.57 | n/a | 1.33 | n/a | n/a | |||
| ZFX_HUMAN | -1.26 | 1.45 | 1.33 | -1.16 | Weak Discordant |
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Motif analysis
