rs800552 chr8:115804530 G>T
- Sequence
aaatcctgtaaatccagcaacagt[G/T]agatttctaccaacacataattcc
- ASB in cell types
- LNCaP (prostate carcinoma) CWR22 (prostate carcinoma) prostate tumor
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN HXB13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.76 | 1.39 | 1.73 | n/a | No Hit | |||
| ANDR_HUMAN | -0.21 | 1.10 | 1.65 | n/a | No Hit | |||
| HXB13_HUMAN | n/a | 2.69 | 3.00 | n/a | No Hit |
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