rs80294619 chr17:73126953 C>A
- Sequence
gtggaaaataaaagcagctctgcc[C/A]ggggatgccacgggctagtctgtc
- ASB in cell types
- SK-N-SH (neuroblastoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -2.38 | 2.43 | 2.00 | 3.53 | Concordant |
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Motif analysis
