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rs8030198 chr15:96162563 A>G

Sequence
cagtcttgtcatcaggccaggagc[A/G]gggcaagatatgagtcccagggac
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
REQU_HUMAN TAL1_HUMAN COT1_HUMAN ZN316_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
REQU_HUMAN -1.51 2.11 1.004.2·10-3 2.00 n/a n/a
TAL1_HUMAN -0.44 1.50 0.980.01 2.00 n/a No Hit
COT1_HUMAN -1.95 2.18 1.000.01 2.00 n/a No Hit
ZN316_HUMAN -1.97 2.04 1.000.03 2.00 n/a n/a
TIF1A_HUMAN -0.60 1.77 1.000.04 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels chronic kidney disease hdl cholesterol infant head circumference

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