rs8048032 chr16:69565900 A>G
- Sequence
cctccccgccctccgggggccgcc[A/G]cggctcttccgcgctcccgggcac
- ASB in cell types
- HEK293 (embryonic kidney) CD14+ monocytes breast tumor tissue
- ASB for transcription factors
- STAT1_HUMAN KLF9_HUMAN ESR1_HUMAN ZBT20_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | n/a | 3.11 | 2.50 | n/a | No Hit | |||
| KLF9_HUMAN | 2.97 | n/a | 2.00 | -3.13 | Concordant | |||
| ESR1_HUMAN | n/a | 2.59 | 2.50 | n/a | No Hit | |||
| ZBT20_HUMAN | 2.40 | n/a | 2.00 | n/a | n/a | |||
| ZN148_HUMAN | 2.49 | -3.11 | 1.50 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cortex, Brain_Hippocampus, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid, Whole_Blood