ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs805010
chr3:120561313
T
>
C
Sequence
aagatgacattactttgtgttcta[T/C]agctgaataaattgtagcaattgc
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
RAD21_HUMAN
CTCF_HUMAN
SMC3_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN
1.18
-0.28
4.3·10
-5
1.00
2.00
n/a
n/a
CTCF_HUMAN
0.74
0.29
0.03
1.00
1.69
n/a
No Hit
SMC3_HUMAN
0.85
-0.63
0.05
1.00
2.09
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
birth weight
,
microalbuminuria
,
salmonella-induced pyroptosis
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Heart_Atrial_Appendage
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)