rs8055106 chr16:75464925 G>A
- Sequence
tgcagcgccccctgtgagaaagta[G/A]ggaattgcatgcgccccaacagag
- ASB in cell types
- epidermal keratinocytes GM13977 (female B-cells) HeLa Kyoto (cervical adenocarcinoma) AG04449 (fibroblasts)
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.64 | 0.10 | 1.46 | n/a | No Hit | |||
| SMC3_HUMAN | 0.91 | -0.40 | 2.00 | n/a | n/a |
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