ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs805770
chr20:5688068
C
>
T
Sequence
agtttgcaccttccccttcctgct[C/T]atgcaaggaagtgttgcgcccttc
ASB in cell types
upper lobe of left lung
fetal bone marrow-derived mononuclear cells
tibial nerve
ASB for transcription factors
EP300_HUMAN
KMT2A_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EP300_HUMAN
-0.18
1.69
1.00
1.3·10
-4
1.43
n/a
n/a
KMT2A_HUMAN
2.00
n/a
0.01
1.00
2.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
EMBL-EBI
heel bone mineral density
,
waist-hip ratio
GRASP
2 hour glucose
,
brain atrophy
,
height
,
hip bone mineral density (bmd)
,
schizophrenia
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Lung
,
Whole_Blood
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)