rs805771 chr20:5689748 C>T
- Sequence
aaaccctgagtgtaaacagggttt[C/T]ccttgtcaaggaacggaaattggt
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- GABPA_HUMAN NFIL3_HUMAN RARA_HUMAN ETV5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABPA_HUMAN | 1.57 | -1.03 | 1.50 | n/a | No Hit | |||
| NFIL3_HUMAN | 1.25 | -1.78 | 1.42 | n/a | n/a | |||
| RARA_HUMAN | 1.58 | -1.90 | 1.50 | n/a | No Hit | |||
| ETV5_HUMAN | 1.58 | -1.90 | 1.50 | n/a | No Hit | |||
| TFE3_HUMAN | 1.87 | -1.90 | 1.33 | n/a | No Hit |
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