rs8058370 chr16:81738205 G>T
- Sequence
ctggtggcacaattgacaacagtc[G/T]ggtagtgacgcctgtcagcatggt
- ASB in cell types
- K562 (myelogenous leukemia) A549 (lung carcinoma) HepG2 (hepatoblastoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- SMC3_HUMAN MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 0.22 | 1.55 | 1.86 | n/a | n/a | |||
| MNT_HUMAN | 1.65 | 0.38 | 2.38 | n/a | n/a |
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