rs8059445 chr16:81738133 C>T
- Sequence
ccaggaattgagttccttgcagcg[C/T]gggggagggcaaggtgtgcagaat
- ASB in cell types
- A549 (lung carcinoma) HepG2 (hepatoblastoma) GM12878 (female B-cells) CD14+ monocytes
- ASB for transcription factors
- CTCF_HUMAN STAT1_HUMAN RAD21_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.75 | 0.90 | 1.57 | n/a | No Hit | |||
| STAT1_HUMAN | -0.89 | 1.66 | 2.12 | n/a | No Hit | |||
| RAD21_HUMAN | 1.38 | 1.67 | 1.89 | n/a | n/a | |||
| SMC3_HUMAN | 1.18 | 0.52 | 1.88 | n/a | n/a | |||
| SPI1_HUMAN | 0.52 | 2.03 | 1.78 | n/a | No Hit |
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