rs806172 chr7:127656948 G>A
- Sequence
gtggtcttaaaatgcccatttccc[G/A]gcaggtaagcctggtagcttttaa
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| MCF7 (Invasive ductal breast carcinoma) | -2.39 | 1.96 | 1.50 |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, alzheimers disease, body mass index (bmi), parkinsons disease, primary rhegmatogenous retinal detachment, serum creatinine, spine bone mineral density (bmd)
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Thyroid