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rs8070030 chr17:35537811 T>A

Sequence
ttttaaagtttccatttctcagaa[T/A]tctcctactcattttaggcctgcc
ASB in cell types
K562 (myelogenous leukemia) GM12878 (female B-cells)
ASB for transcription factors
KDM1A_HUMAN HDAC2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM1A_HUMAN 1.70 -0.86 0.051.00 2.00 n/a n/a
HDAC2_HUMAN 1.92 -1.77 0.051.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose college completion total cholesterol waist hip ratio years of education
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Hippocampus Breast_Mammary_Tissue Cells_EBV-transformed_lymphocytes Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Muscle_Skeletal Nerve_Tibial Spleen Testis Thyroid

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