rs8070447 chr17:45151932 A>C
- Sequence
aaaatgcaccttgtattgcataag[A/C]agcatacacaaatcaataaatcaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ATF3_HUMAN ATF4_HUMAN ZEB2_HUMAN MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | n/a | 0.91 | 2.00 | n/a | No Hit | |||
| ATF4_HUMAN | n/a | 1.24 | 2.00 | 0.73 | Weak Concordant | |||
| ZEB2_HUMAN | -0.82 | 2.07 | 2.00 | n/a | n/a | |||
| MNT_HUMAN | -0.31 | 1.72 | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | 0.07 | 1.78 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GRASP 2 hour glucose, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, arthritis including non-rheumatoid, asthma, eye color, ldl cholesterol, schizophrenia, total cholesterol, triglycerides
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Cortex, Brain_Frontal_Cortex_BA9, Esophagus_Mucosa, Esophagus_Muscularis, Nerve_Tibial, Stomach, Thyroid, Whole_Blood