rs8074207 chr17:1829798 T>A
- Sequence
gacgcgcccggaactgcgccctgg[T/A]ctccctcccagcgcccgcgcagct
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HEK293T (embryonic kidney) upper lobe of left lung HEK293 (embryonic kidney)
- ASB for transcription factors
- MNT_HUMAN NRF1_HUMAN ESR1_HUMAN ZN600_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | -2.34 | 2.11 | 1.50 | n/a | n/a | |||
| NRF1_HUMAN | -1.17 | 1.13 | 1.33 | n/a | No Hit | |||
| ESR1_HUMAN | n/a | 2.46 | 2.50 | n/a | No Hit | |||
| ZN600_HUMAN | -2.06 | 2.29 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Sun_Exposed_Lower_leg, Testis