rs8075 chr8:73976381 G>C
- Sequence
gccgccgcgctccgaggtccccgg[G/C]cctctgtctcccgggcgtcctcca
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells) HepG2 (hepatoblastoma) HEK293T (embryonic kidney)
- ASB for transcription factors
- ZBT8A_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT8A_HUMAN | 2.23 | n/a | 1.33 | n/a | n/a | |||
| FOXK2_HUMAN | 1.98 | -1.71 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Pancreas, Stomach, Testis