rs8076031 chr17:8247086 G>C
- Sequence
cggctcactgcaacctccacttcc[G/C]tggttccctgctcagcttcctgag
- ASB in cell types
- HEK293 (embryonic kidney) ICN12 (primary pre-B acute lymphomablastic leukemia) monocyte-derived macrophages
- ASB for transcription factors
- OSR2_HUMAN PBX1_HUMAN SP2_HUMAN ZN555_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| OSR2_HUMAN | 3.14 | n/a | 2.00 | n/a | No Hit | |||
| PBX1_HUMAN | 2.52 | -2.58 | 1.33 | n/a | No Hit | |||
| SP2_HUMAN | 2.29 | n/a | 1.50 | 0.56 | Weak Discordant | |||
| ZN555_HUMAN | 2.37 | n/a | 2.00 | n/a | n/a | |||
| Z518A_HUMAN | 2.08 | -2.00 | 1.50 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Colon_Transverse, Heart_Left_Ventricle, Lung, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Testis, Whole_Blood