rs8110830 chr19:17469374 A>G
- Sequence
gggcttggatttaggacaagctgg[A/G]gcaagaatacagcccgcgcgggcc
- ASB in cell types
- K562 (myelogenous leukemia) breast tumor tissue
- ASB for transcription factors
- FOXK2_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 1.93 | -2.31 | 2.00 | n/a | n/a | |||
| ESR1_HUMAN | -3.95 | 2.18 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood