rs8111050 chr19:2524836 G>A
- Sequence
gtgtgcatgcgtgttggcgtgtgt[G/A]tacgtcactgtaggtgcgtggata
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CLOCK_HUMAN ATF3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CLOCK_HUMAN | n/a | 3.07 | 2.50 | n/a | No Hit | |||
| ATF3_HUMAN | 0.86 | n/a | 2.00 | -0.73 | Weak Concordant |
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Motif analysis
