rs8139142 chr22:21555991 T>C
- Sequence
tcttaagcctgtatacccagccct[T/C]tgggaggcggggatgggtggagta
- ASB in cell types
- HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma) LNCaP C4-2B (prostate carcinoma)
- ASB for transcription factors
- FOS_HUMAN ZFX_HUMAN GLIS1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOS_HUMAN | 2.40 | -2.69 | 1.50 | n/a | n/a | |||
| ZFX_HUMAN | 1.48 | -1.11 | 1.17 | n/a | No Hit | |||
| GLIS1_HUMAN | -1.56 | 1.90 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, body mass index (bmi), hdl cholesterol, height, mean corpuscular volume (mcv), rheumatoid arthritis, total cholesterol, triglycerides