rs817370 chr20:63941711 T>C
- Sequence
agctggctcagtgtctcttggctg[T/C]cccgtcccgccccgctgcccaagc
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia)
- ASB for transcription factors
- SP2_HUMAN ZBT26_HUMAN NFIC_HUMAN GLIS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP2_HUMAN | 2.55 | n/a | 2.00 | 1.78 | Weak Discordant | |||
| ZBT26_HUMAN | 2.57 | n/a | 2.50 | n/a | n/a | |||
| NFIC_HUMAN | n/a | 2.53 | 2.00 | n/a | No Hit | |||
| GLIS1_HUMAN | 2.10 | -1.93 | 2.00 | n/a | n/a | |||
| MNT_HUMAN | -0.95 | 1.29 | 2.00 | n/a | n/a |
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Motif analysis
