ADASTRA v1.6.10
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rs820874
chr5:74684796
G
>
C
Sequence
ggttcaagagattctcctgcctca[G/C]cctcccgagtagctgggactacag
ASB in cell types
K562 (myelogenous leukemia)
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
-0.14
0.76
1.00
2.6·10
-16
1.99
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Brain_Caudate_basal_ganglia
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Brain_Cortex
,
Brain_Frontal_Cortex_BA9
,
Brain_Nucleus_accumbens_basal_ganglia
,
Brain_Putamen_basal_ganglia
,
Colon_Sigmoid
,
Heart_Left_Ventricle
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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