ADASTRA v1.6.10
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rs823674
chr1:40774799
T
>
A
Sequence
tgcccttttacttcccttttcact[T/A]attgagctcctatacatccatcaa
ASB in cell types
K562 (myelogenous leukemia)
HEK293 (embryonic kidney)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
0.38
0.64
0.59
1.7·10
-13
1.32
HEK293 (embryonic kidney)
-0.33
0.64
1.00
0.01
1.99
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
bipolar disorder versus schizophrenia
,
transmission distortion
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Tibial
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Brain_Hypothalamus
,
Brain_Nucleus_accumbens_basal_ganglia
,
Brain_Putamen_basal_ganglia
,
Cells_Cultured_fibroblasts
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pituitary
,
Prostate
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
,
Testis
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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