rs826230 chr3:24264811 G>A
- Sequence
tcttgttgcaaaaaaaaaaaaact[G/A]gactttgtgcttttagtagcaata
- ASB in cell types
- HEK293 (embryonic kidney) thyroid gland liver GM12878 (female B-cells)
- ASB for transcription factors
- CTCF_HUMAN HNF4A_HUMAN ZFHX2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.81 | 1.08 | 1.27 | n/a | No Hit | |||
| HNF4A_HUMAN | 2.20 | n/a | 1.33 | -3.23 | Concordant | |||
| ZFHX2_HUMAN | n/a | 2.29 | 2.00 | n/a | n/a |
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Motif analysis
