rs826959 chr20:43733266 G>T
- Sequence
agccaagaagaaaggccttacctt[G/T]ccctgctggcaccttgatcttgga
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -1.33 | 1.14 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP ldl cholesterol change with statins, neuroblastoma (brain cancer), systolic blood pressure (sbp)