rs827939 chr20:48164201 T>C
- Sequence
cgcacacacacgcactcacaccca[T/C]tcactcactcacaggcacacaccc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- NONO_HUMAN P66B_HUMAN MTA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NONO_HUMAN | -0.43 | 2.23 | 3.17 | n/a | n/a | |||
| P66B_HUMAN | n/a | 2.07 | 6.00 | n/a | n/a | |||
| MTA3_HUMAN | n/a | 2.53 | 5.00 | n/a | n/a |
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