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rs828657 chr6:71349181 A>T

Sequence
atttgcctcttaaaaatcctggat[A/T]atgagaatttattgacttaagtca
ASB in cell types
SK-N-SH (neuroblastoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.92 0.92 0.900.02 1.26 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd ldl cholesterol total cholesterol triglycerides change with statins
GTEx eQTL Brain_Cerebellar_Hemisphere Brain_Cerebellum Muscle_Skeletal Pancreas

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