ADASTRA v1.6.10
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rs831760
chr1:201185102
C
>
G
Sequence
tatgcatgggcaggagagtgccct[C/G]ttcagcatggaagagcaactccac
ASB in cell types
HEK293 (embryonic kidney)
HEK293T (embryonic kidney)
ASB for transcription factors
ZN600_HUMAN
PRDM9_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN600_HUMAN
2.85
n/a
8.4·10
-4
1.00
2.00
n/a
n/a
PRDM9_HUMAN
2.10
-1.84
9.2·10
-3
1.00
1.33
n/a
n/a
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5
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Artery_Tibial
,
Lung
,
Muscle_Skeletal
,
Stomach
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)