ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs831882
chr3:97911582
G
>
T
Sequence
acagatatctttctttcttcacca[G/T]aaatcttccactaatcccgtcatt
ASB in cell types
D341 Med (medulloblastoma)
LHSAR (prostate epithelial cells)
ASB for transcription factors
OTX2_HUMAN
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OTX2_HUMAN
-0.16
1.07
1.00
1.4·10
-3
1.33
n/a
No Hit
ANDR_HUMAN
-0.37
1.14
0.92
0.02
1.62
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
fasting insulin
,
schizophrenia
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Brain_Frontal_Cortex_BA9
,
Esophagus_Mucosa
,
Muscle_Skeletal
,
Skin_Sun_Exposed_Lower_leg
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)