rs833061 chr6:43769749 C>T
- Sequence
agtgtgtgcgtgtggggttgaggg[C/T]gttggagcggggagaaggccaggg
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) PC9 (lung adenocarcinoma) foreskin keratinocyte
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 0.13 | 0.68 | 1.18 | n/a | n/a | |||
| RAD21_HUMAN | 0.24 | 0.51 | 1.34 | n/a | n/a | |||
| HDAC1_HUMAN | -3.10 | 2.19 | 3.00 | n/a | n/a |
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