ADASTRA v1.6.10
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rs833068
chr6:43774790
G
>
A
Sequence
acatgtcccatttgtgggaactgt[G/A]acccttcctgtgtgagctggaggc
ASB in cell types
K562 (myelogenous leukemia)
GM12878 (female B-cells)
bipolar neuron
ASB for transcription factors
IKZF2_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN
2.60
n/a
2.9·10
-5
1.00
1.33
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
autism with verbal ability
,
diastolic blood pressure (dbp)
,
resistance to kuru in aged women despite likely exposure
GTEx eQTL
Adrenal_Gland
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Pancreas
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)