rs838144 chr19:48746982 C>T
- Sequence
actgcaacaaagggaggtcccgcc[C/T]atcgctccatgacgtcacagaggc
- ASB in cell types
- K562 (myelogenous leukemia) monocyte-derived macrophages
- ASB for transcription factors
- TF65_HUMAN ATF3_HUMAN NRF1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | n/a | 2.29 | 2.50 | n/a | No Hit | |||
| ATF3_HUMAN | 1.51 | n/a | 2.00 | n/a | No Hit | |||
| NRF1_HUMAN | 1.90 | -0.74 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, bipolar disorder, birth weight, body mass index (bmi), chronic kidney disease, cystatin c in serum, infant head circumference, ldl cholesterol, major depressive disorder and bipolar disorder combined analysis, serum creatinine, total cholesterol, triglycerides, years of education
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Cortex, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Testis, Thyroid, Whole_Blood