rs838491 chr12:124682118 G>A
- Sequence
gtccaccctgatgacctcatctca[G/A]cttgatcacatctgcaaagatcct
- ASB in cell types
- cranial neural crest cells MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- COT1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | n/a | 3.92 | 2.50 | n/a | No Hit | |||
| ESR1_HUMAN | 0.80 | -0.00 | 1.46 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, fasting blood glucose, mitral annular calcium, total cholesterol, waist hip ratio