Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs838559 chr2:233487008 A>G

Sequence
cctggaagttggtcaaggacagaa[A/G]agcccatggaaggggcctgaggag
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
EP300_HUMAN GCR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EP300_HUMAN 1.21 -0.42 6.2·10-31.00 2.06 n/a n/a
GCR_HUMAN 1.33 0.04 0.021.00 2.04 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Cerebellum Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Hypothalamus Brain_Nucleus_accumbens_basal_ganglia Cells_Cultured_fibroblasts Esophagus_Mucosa Heart_Left_Ventricle Muscle_Skeletal Testis

Download