ADASTRA v1.6.10
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rs841116
chr5:87781303
T
>
A
Sequence
cactgagatcacagaagagagact[T/A]ctcacaaagccgctagatggcgtg
ASB in cell types
HeLa S3 (cervical adenocarcinoma)
epidermal keratinocytes
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HeLa S3 (cervical adenocarcinoma)
-0.64
1.56
1.00
4.9·10
-3
2.08
epidermal keratinocytes
1.90
-1.47
0.02
1.00
2.00
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5
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Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
hdl cholesterol
,
height
,
mitral annular calcium
GTEx eQTL
Brain_Frontal_Cortex_BA9
,
Colon_Sigmoid
,
Nerve_Tibial
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale