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rs841620 chr12:27145798 G>T

Sequence
aattgtaaacattagcttgtgaaa[G/T]aattctgtttcatatccacagtag
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
MEF2B_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2B_HUMAN 2.03 -2.06 7.3·10-31.00 1.33 n/a No Hit
IKZF2_HUMAN 1.80 -1.53 0.031.00 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP mitral annular calcium
GTEx eQTL Artery_Tibial Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Nucleus_accumbens_basal_ganglia Cells_Cultured_fibroblasts Esophagus_Mucosa Pancreas Testis Thyroid

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