rs841735 chr20:58252368 A>G
- Sequence
cccttacaagaaaaaaaaaaaaaa[A/G]aaaaaaaagattaaattttgcatt
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ATF4_HUMAN SMCE1_HUMAN ATF3_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF4_HUMAN | n/a | 3.18 | 2.00 | n/a | No Hit | |||
| SMCE1_HUMAN | n/a | 2.81 | 2.50 | n/a | n/a | |||
| ATF3_HUMAN | n/a | 0.79 | 2.00 | n/a | No Hit | |||
| IKZF1_HUMAN | -2.13 | 2.21 | 2.00 | n/a | No Hit | |||
| MNT_HUMAN | n/a | 2.73 | 5.00 | n/a | n/a |
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Motif analysis
