rs841841 chr1:42923244 T>A
- Sequence
taacaggagtaggtgggagggcag[T/A]ctcttcggaggaaacttcagaggc
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells) HEK293T (embryonic kidney) PC9 (lung adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN EGR2_HUMAN ZBT17_HUMAN ZN366_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.38 | 0.75 | 1.35 | n/a | No Hit | |||
| EGR2_HUMAN | -0.56 | 2.33 | 2.00 | n/a | No Hit | |||
| ZBT17_HUMAN | n/a | 0.67 | 2.00 | n/a | No Hit | |||
| ZN366_HUMAN | n/a | 2.32 | 2.00 | n/a | n/a |
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