rs841850 chr1:42936383 T>C
- Sequence
gttggggctggccccacactgccc[T/C]tcccacaagctctcagcccagggc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- RFX1_HUMAN NCOR1_HUMAN PRD10_HUMAN REST_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFX1_HUMAN | n/a | 0.72 | 1.33 | n/a | No Hit | |||
| NCOR1_HUMAN | -1.18 | 1.42 | 1.33 | n/a | n/a | |||
| PRD10_HUMAN | -1.79 | 1.60 | 1.33 | n/a | n/a | |||
| REST_HUMAN | -1.59 | 1.38 | 1.33 | n/a | No Hit | |||
| MTG8R_HUMAN | n/a | 0.48 | 1.33 | n/a | n/a |
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Motif analysis
