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rs842442 chr7:158777180 T>G

Sequence
cttctgactgaaagtgagaggcgt[T/G]caactctgtctttcacttaaatac
ASB in cell types
K562 (myelogenous leukemia)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.60 0.02 0.010.95 1.50
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Motif analysis

No data available

Genetic associations

GRASP college completion fasting insulin homa-ir ldl cholesterol total cholesterol years of education
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Tibial Brain_Cerebellar_Hemisphere Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Transverse Esophagus_Mucosa Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Stomach Testis Thyroid Whole_Blood

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