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rs842639 chr2:60868110 G>A

Sequence
cagtggtcttgagcaacagtacgc[G/A]tacggtaactgttaagtataatac
ASB in cell types
CD14+ monocytes
ASB for transcription factors
KAISO_HUMAN SPI1_HUMAN STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KAISO_HUMAN 1.91 -2.18 9.4·10-51.00 1.33 n/a No Hit
SPI1_HUMAN 0.14 1.47 1.004.3·10-3 2.06 n/a No Hit
STAT1_HUMAN -3.51 2.19 1.005.6·10-3 2.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI multiple sclerosis
GRASP celiac disease obesity with early age of onset (age >2) prop taste detection threshold resistance to kuru in aged women despite likely exposure schizophrenia total cholesterol
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Tibial Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Lung Muscle_Skeletal Nerve_Tibial Skin_Sun_Exposed_Lower_leg Thyroid

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