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rs842650 chr2:60881861 A>T

Sequence
agccatggcctccggtgagtgttc[A/T]tggggcgcgggcctgggccggggg
ASB in cell types
breast tumor tissue cranial neural crest cells
ASB for transcription factors
ESR1_HUMAN AP2A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 2.37 n/a 3.0·10-31.00 2.50 n/a No Hit
AP2A_HUMAN 1.95 -1.43 0.021.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Colon_Transverse Skin_Sun_Exposed_Lower_leg

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