Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs843247 chr2:155634365 G>A

Sequence
atctataacttctgcctttgacca[G/A]ttctgtttttctcactcccttata
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF2_HUMAN IKZF1_HUMAN MEF2B_HUMAN ZNF24_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 3.27 n/a 6.2·10-91.00 1.50 n/a n/a
IKZF1_HUMAN 3.08 n/a 1.5·10-81.00 1.33 n/a No Hit
MEF2B_HUMAN 2.70 -3.22 9.0·10-61.00 1.33 n/a No Hit
ZNF24_HUMAN 2.20 n/a 6.0·10-31.00 1.33 n/a n/a
BACH1_HUMAN 2.03 -2.06 0.021.00 1.33 n/a No Hit
Items per page:
1 – 5 of 5

Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy)

Download