rs846744 chr20:50718166 A>G
- Sequence
tccaagctctcccagctcagagag[A/G]ctccctgccttgctccccatcacc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HEK293 (embryonic kidney)
- ASB for transcription factors
- CTCF_HUMAN CSN2_HUMAN NCOA3_HUMAN FOXA1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.94 | 2.16 | 2.26 | n/a | No Hit | |||
| CSN2_HUMAN | n/a | 2.87 | 3.00 | n/a | n/a | |||
| NCOA3_HUMAN | n/a | 2.43 | 4.00 | n/a | n/a | |||
| FOXA1_HUMAN | n/a | 1.95 | 5.00 | n/a | No Hit |
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