rs847155 chr2:176097852 T>C
- Sequence
tctcttaatcaccagccaagccac[T/C]ctcccgccactactttccaccccg
- ASB in cell types
- liver NB69 (neuroblastoma)
- ASB for transcription factors
- ZN341_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN341_HUMAN | -2.86 | 2.68 | 1.33 | -0.24 | Weak Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Nerve_Tibial, Testis, Whole_Blood