ADASTRA v1.6.10
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rs847158
chr2:176097374
A
>
G
Sequence
cactgggagggaggccctcgggga[A/G]cccggaaggctaagggggcttgga
ASB in cell types
K562 (myelogenous leukemia)
HEK293 (embryonic kidney)
HEK293T (embryonic kidney)
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
0.64
0.22
5.2·10
-8
0.99
1.29
HEK293 (embryonic kidney)
0.62
0.27
9.9·10
-4
0.93
1.29
HEK293T (embryonic kidney)
-0.37
1.06
1.00
6.1·10
-3
2.00
Items per page:
5
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Motif analysis
No data available
Genetic associations
EMBL-EBI
digit length ratio
,
digit length ratio (left hand)
,
digit length ratio (right hand)
GRASP
comorbid depressive syndrome and alcohol dependence
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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