rs847196 chr2:176092390 C>G
- Sequence
agacaaggcgcaggccttggcgcc[C/G]gcctcagtcgcagacagggcctgg
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- SCRT2_HUMAN ZN398_HUMAN ZBT26_HUMAN ZN335_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SCRT2_HUMAN | n/a | 2.92 | 1.50 | n/a | n/a | |||
| ZN398_HUMAN | -3.00 | 2.78 | 1.33 | n/a | n/a | |||
| ZBT26_HUMAN | -1.92 | 2.05 | 1.00 | n/a | n/a | |||
| ZN335_HUMAN | -1.96 | 2.11 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Thyroid