rs852510 chr7:5564930 T>C
- Sequence
ggagcttgcagtgagccgagatcg[T/C]gccattgcactgtagccttgacaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- KAISO_HUMAN RFX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KAISO_HUMAN | n/a | 2.89 | 2.00 | 3.19 | Concordant | |||
| RFX1_HUMAN | -2.77 | 2.07 | 2.00 | n/a | No Hit |
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Motif analysis
